PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110604.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 547aa    MW: 61019.3 Da    PI: 7.1605
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110604.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55e-05117139123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+Cg+sF++ ++   H  ++
  XP_010110604.1 117 FECPICGQSFRTEEEVSEHVESC 139
                     89**************9998776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.10.20.903.2E-92758No hitNo description
PROSITE profilePS501579.078117146IPR007087Zinc finger, C2H2
CDDcd092123.21E-20166261No hitNo description
SMARTSM005801.1E-15179246IPR018997PUB domain
SuperFamilySSF1435036.02E-18179262IPR018997PUB domain
PfamPF094092.5E-16181251IPR018997PUB domain
SuperFamilySSF542363.36E-12401513IPR029071Ubiquitin-related domain
Gene3DG3DSA:3.10.20.903.2E-9418480No hitNo description
PROSITE profilePS500339.744430514IPR001012UBX domain
PfamPF007891.9E-5431480IPR001012UBX domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MDDVKDKVKG FMKKVNSSLS SSSSSSGKFK GQGRVLGSAS SGPSNPIPHR SSQIPQSKPL  60
SAPNSKPANS PKTPSVSDQR RSDSSNPDRE PANGFDPFDT LITIGKRSQN GYSVQVFECP  120
ICGQSFRTEE EVSEHVESCV NNNSDNTVEN GGSNNENDSS ESELEACIGA FLSGELASGS  180
VEIVFKLLNN VVREPENAKF RRIRMGNAKI KEAVVDVAGG VELLEFVGFE LKEEDGEMWA  240
AMEVPSEERI RLIKHAIRLL EPQKVQEPGR TSDSKPVASV EVEEKVEPKK IDRQILRLRE  300
ISEVNKLIFY SRERESPISV TRHDDELVEK NSLHQYNKLS FCDYKKRALR SSNSHKLSLI  360
SARSGLETKT KVFFSVPENV AAKIELPDSF YNLSLEEVKR EAEMRKKKLA DSQLLIPKSY  420
KEKQAKAAKR RYKRTIIRIQ FPDGVVLQGI FNPWEPTSSL YQFVSSALKE PSLEFELLHP  480
LVIKRRVIPC FPAAGQKPTI LEDEDLVPAA LVKFRPIETD SLVFTGLRNE LLEIMEPLVV  540
DTAVALA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110604.10.0UBX domain-containing protein 6
SwissprotQ9ZU939e-90PUX2_ARATH; Plant UBX domain-containing protein 2
TrEMBLW9S5N50.0W9S5N5_9R
STRINGGLYMA08G04760.59e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89442529